Apple Crisp Cupcakes are a delightful twist on a classic fall treat. These moist, spiced cupcakes are loaded with fresh apple pieces and topped with a buttery streusel and creamy cinnamon frosting. Perfect for gatherings, celebrations, or simply to satisfy your sweet tooth, these cupcakes bring the comforting flavors of autumn right to your fingertips.

Jump to:
- Why You’ll Love This Recipe
- Tools and Preparation
- Essential Tools and Equipment
- Importance of Each Tool
- Ingredients
- For the Cupcake Batter
- For the Streusel Topping
- For the Frosting
- How to Make Apple Crisp Cupcakes
- Step 1: Preheat the Oven
- Step 2: Prepare the Streusel Topping
- Step 3: Mix Dry Ingredients
- Step 4: Cream Butter and Sugar
- Step 5: Add Eggs
- Step 6: Combine Wet and Dry Ingredients
- Step 7: Fold in Apples
- Step 8: Fill Muffin Cups
- Step 9: Add Streusel Topping
- Step 10: Bake
- Step 11: Cool Cupcakes
- Step 12: Prepare Frosting
- Step 13: Frost Cupcakes
- How to Serve Apple Crisp Cupcakes
- Pair with Ice Cream
- Serve with Fresh Fruit
- Add a Drizzle
- Coffee or Tea Pairing
- How to Perfect Apple Crisp Cupcakes
- Best Side Dishes for Apple Crisp Cupcakes
- Common Mistakes to Avoid
- Storage & Reheating Instructions
- Refrigerator Storage
- Freezing Apple Crisp Cupcakes
- Reheating Apple Crisp Cupcakes
- Frequently Asked Questions
- Can I use different types of apples?
- How do I make these Apple Crisp Cupcakes gluten-free?
- How do I improve the flavor of my Apple Crisp Cupcakes?
- Can I replace cream cheese frosting with something else?
- What is the best way to store leftover Apple Crisp Cupcakes?
- Final Thoughts
- 📖 Recipe Card
Why You’ll Love This Recipe
- Delicious Flavor: The combination of spiced cupcakes and fresh apples creates a mouthwatering taste that captures the essence of fall.
- Easy to Make: With straightforward instructions, you’ll have these delightful cupcakes ready in no time.
- Versatile Treat: Ideal for parties, holidays, or casual get-togethers—everyone will love them!
- Impressive Presentation: The beautiful layers of streusel and frosting make these cupcakes look as good as they taste.
- Handheld Dessert: Enjoy all the flavors of an apple crisp in a convenient cupcake form.
Tools and Preparation
To create these delicious Apple Crisp Cupcakes, you’ll need a few essential tools for an easy baking experience.
Essential Tools and Equipment
- Muffin tin
- Paper liners
- Mixing bowls
- Electric mixer
- Rubber spatula
- Pastry cutter
Importance of Each Tool
- Muffin tin: Provides the perfect shape for your cupcakes and ensures even baking.
- Electric mixer: Saves time and effort when creaming butter and sugar together for a light batter.
- Rubber spatula: Great for folding in ingredients gently without deflating the batter.

Ingredients
These Apple Crisp Cupcakes feature a moist spiced cupcake studded with fresh apple pieces, crowned with buttery streusel topping and cinnamon cream cheese frosting – the perfect handheld version of the classic fall dessert.
For the Cupcake Batter
- 1½ cups all-purpose flour
- 1½ teaspoons baking powder
- ½ teaspoon salt
- 1 teaspoon ground cinnamon
- ¼ teaspoon ground nutmeg
- ½ cup unsalted butter (softened)
- 1 cup granulated sugar
- 2 large eggs (room temperature)
- 1 teaspoon vanilla extract
- ½ cup milk
- 1½ cups peeled and diced apples (about 2 medium apples, preferably Granny Smith or Honeycrisp)
For the Streusel Topping
- ½ cup all-purpose flour
- ⅓ cup packed brown sugar
- ¼ cup old-fashioned oats
- 1 teaspoon ground cinnamon
- ¼ teaspoon salt
- ¼ cup cold unsalted butter (cubed)
For the Frosting
- 8 oz cream cheese (softened)
- ¼ cup unsalted butter (softened)
- 3 cups powdered sugar
- 1 teaspoon vanilla extract
- 1 teaspoon ground cinnamon
- Pinch of salt
How to Make Apple Crisp Cupcakes
Step 1: Preheat the Oven
Preheat your oven to 350°F (175°C) and line a standard muffin tin with paper liners. This ensures your cupcakes won’t stick and makes for easy serving.
Step 2: Prepare the Streusel Topping
In a medium bowl, combine flour, brown sugar, oats, cinnamon, and salt. Cut in the cold butter using a pastry cutter or your fingertips until it resembles coarse crumbs with pea-sized pieces. Refrigerate while preparing the cupcake batter.
Step 3: Mix Dry Ingredients
In another medium bowl, whisk together flour, baking powder, salt, cinnamon, and nutmeg until well combined. This step ensures even distribution of leavening agents and spices.
Step 4: Cream Butter and Sugar
In a large bowl, cream together softened butter and granulated sugar using an electric mixer on medium speed until light and fluffy (about 3-4 minutes). This process incorporates air into the batter for lighter cupcakes.
Step 5: Add Eggs
Add eggs one at a time while beating well after each addition. Then mix in vanilla extract. Ensure each egg is fully incorporated before adding the next to achieve proper emulsion.
Step 6: Combine Wet and Dry Ingredients
Gradually add dry ingredients to wet ingredients, alternating with milk. Start and end with dry ingredients (three additions of dry, two of milk). Mix on low speed just until combined after each addition.
Step 7: Fold in Apples
Gently fold diced apples into the batter using a rubber spatula. Avoid overmixing to keep your cupcakes tender.
Step 8: Fill Muffin Cups
Divide batter evenly among muffin cups, filling each about 2/3 full to allow room for rising without overflowing.
Step 9: Add Streusel Topping
Generously sprinkle streusel topping over each cupcake. Gently press it into the batter so it adheres while baking.
Step 10: Bake
Bake for 22-25 minutes or until a toothpick inserted into the center comes out clean with just a few moist crumbs. The streusel should be golden brown and slightly crisp.
Step 11: Cool Cupcakes
Cool cupcakes in the pan for 5 minutes before transferring them to a wire rack to cool completely before frosting.
Step 12: Prepare Frosting
While cooling, beat together softened cream cheese and butter until smooth. Gradually add powdered sugar before mixing in vanilla extract, cinnamon, and salt until well combined and fluffy.
Step 13: Frost Cupcakes
Once completely cool, pipe or spread cinnamon cream cheese frosting on top of each cupcake while leaving some streusel visible around the edges for visual appeal.
How to Serve Apple Crisp Cupcakes
Apple Crisp Cupcakes are a delightful treat that can be enjoyed in various ways. Whether for a festive occasion or a casual dessert, these cupcakes bring warmth and comfort to any gathering. Here are some serving suggestions to elevate your cupcake experience.
Pair with Ice Cream
- Vanilla Ice Cream: A classic pairing, the creamy texture complements the spiced flavors of the cupcakes.
- Caramel Swirl Ice Cream: Adds a rich, buttery sweetness that enhances the apple flavors.
- Cinnamon Ice Cream: For those who love spice, this option adds an extra kick.
Serve with Fresh Fruit
- Sliced Apples: Freshly sliced apples on the side echo the cupcake’s flavor and add a crunchy contrast.
- Berries: Raspberries or strawberries provide a tart freshness that balances the sweetness of the cupcakes.
Add a Drizzle
- Caramel Sauce: A warm drizzle of caramel sauce over the frosting can create an indulgent touch.
- Chocolate Sauce: For chocolate lovers, a light drizzle can add depth and richness.
Coffee or Tea Pairing
- Hot Coffee: The bitterness of coffee pairs wonderfully with sweet desserts, enhancing their flavors.
- Chai Tea: The spices in chai complement the cinnamon and nutmeg found in the cupcakes perfectly.
How to Perfect Apple Crisp Cupcakes
Achieving perfect Apple Crisp Cupcakes requires attention to detail and some helpful techniques. Here are tips to ensure your cupcakes turn out exceptional every time.
- Use Room Temperature Ingredients: Ensuring eggs and butter are at room temperature helps them blend more easily for a smoother batter.
- Don’t Overmix: When combining wet and dry ingredients, mix just until combined. Overmixing can lead to dense cupcakes.
- Choose Fresh Apples: Using fresh, crisp apples like Granny Smith or Honeycrisp adds moisture and flavor.
- Check for Doneness Early: Oven temperatures can vary; check your cupcakes a few minutes before the recommended time to avoid overbaking.
Best Side Dishes for Apple Crisp Cupcakes
To create a well-rounded meal around your Apple Crisp Cupcakes, consider serving them with complementary side dishes. These pairings enhance both flavor and presentation.
- Cheese Platter: A selection of cheeses like sharp cheddar or brie offers savory notes that balance sweetness.
- Mixed Green Salad: A light salad with vinaigrette provides freshness and acidity to cut through the richness of the cupcakes.
- Roasted Vegetables: Seasonal roasted vegetables add heartiness and texture to your dessert spread.
- Sweet Potato Fries: Their natural sweetness pairs well with apple flavors while offering a crispy contrast.
- Pumpkin Soup: A warm bowl of pumpkin soup brings comforting autumn vibes that complement dessert beautifully.
- Granola Parfait: Layered yogurt with granola and fruit creates a refreshing side that balances the richness of the cupcakes.
- Fruit Salad: A colorful fruit salad brightens up the table while echoing flavors found in the cupcakes.
- Spiced Nuts: A mix of spiced nuts offers crunch and complements the warm spices in the cupcakes perfectly.
Common Mistakes to Avoid
Baking can sometimes be tricky. Here are some common mistakes to watch out for while making Apple Crisp Cupcakes.
Incorrect oven temperature: Baking at the wrong temperature can lead to cupcakes that are too dry or undercooked. Always preheat your oven and use an oven thermometer if needed.
Overmixing the batter: Overmixing can result in tough cupcakes. Mix just until combined, especially after adding the apples.
Skipping the streusel topping: The streusel adds texture and flavor. Don’t skip this step—ensure you prepare it properly before baking.
Not cooling before frosting: Frosting warm cupcakes can cause the frosting to melt. Allow cupcakes to cool completely on a wire rack.
Using stale ingredients: Freshness matters in baking. Make sure your baking powder is active and that your spices are not expired for the best flavor.

Storage & Reheating Instructions
Refrigerator Storage
- Store Apple Crisp Cupcakes in an airtight container.
- They will stay fresh for up to 3 days in the refrigerator.
Freezing Apple Crisp Cupcakes
- Place cooled cupcakes in a freezer-safe container or wrap them tightly in plastic wrap.
- They can be frozen for up to 3 months. Thaw overnight in the refrigerator before serving.
Reheating Apple Crisp Cupcakes
- Oven: Preheat to 350°F (175°C). Place cupcakes on a baking sheet for about 10 minutes or until warmed through.
- Microwave: Heat individual cupcakes on a microwave-safe plate for 10-15 seconds, checking frequently.
- Stovetop: Use a covered skillet over low heat for about 5 minutes, flipping halfway through to warm evenly.
Frequently Asked Questions
Here are some common questions about making Apple Crisp Cupcakes.
Can I use different types of apples?
Yes, you can use any firm apple variety, such as Fuji or Gala, but Granny Smith or Honeycrisp work best for their tartness and texture.
How do I make these Apple Crisp Cupcakes gluten-free?
To make them gluten-free, substitute all-purpose flour with a gluten-free flour blend that measures cup-for-cup like regular flour.
How do I improve the flavor of my Apple Crisp Cupcakes?
Adding a splash of lemon juice or additional spices like allspice can enhance the flavor profile of your cupcakes.
Can I replace cream cheese frosting with something else?
Absolutely! You can use whipped cream or a simple buttercream frosting if you prefer a lighter option over cream cheese frosting.
What is the best way to store leftover Apple Crisp Cupcakes?
Store them in an airtight container at room temperature for up to two days, or refrigerate them if keeping longer than that.
Final Thoughts
These Apple Crisp Cupcakes bring together delicious flavors and textures that make them an excellent dessert choice. Their versatility allows for customization—add nuts, change up the spices, or experiment with different frostings to suit your taste!
Did You Enjoy Making This Recipe? Please rate this recipe with ⭐⭐⭐⭐⭐ or leave a comment.
📖 Recipe Card
Print
Apple Crisp Cupcakes
- Total Time: 45 minutes
- Yield: 12 servings 1x
Description
Indulge in the cozy flavors of autumn with these delightful Apple Crisp Cupcakes. Each moist, spiced cupcake is generously filled with fresh apple chunks and topped with a buttery streusel and creamy cinnamon frosting, making them a perfect treat for any gathering or a comforting dessert at home. These cupcakes encapsulate the essence of fall, offering a sweet and satisfying experience that is both visually appealing and delicious. Easy to make and even easier to enjoy, these cupcakes are sure to become a favorite!
Ingredients
- 1½ cups all-purpose flour
- 1½ teaspoons baking powder
- ½ teaspoon salt
- 1 teaspoon ground cinnamon
- ¼ teaspoon ground nutmeg
- ½ cup unsalted butter (softened)
- 1 cup granulated sugar
- 2 large eggs (room temperature)
- 1 teaspoon vanilla extract
- ½ cup milk
- 1½ cups peeled and diced apples
- ½ cup all-purpose flour (for streusel)
- ⅓ cup packed brown sugar (for streusel)
- ¼ cup old-fashioned oats (for streusel)
- 1 teaspoon ground cinnamon (for streusel)
- ¼ teaspoon salt (for streusel)
- ¼ cup cold unsalted butter (for streusel)
- 8 oz cream cheese (softened for frosting)
- ¼ cup unsalted butter (softened for frosting)
- 3 cups powdered sugar (for frosting)
- 1 teaspoon vanilla extract (for frosting)
- 1 teaspoon ground cinnamon (for frosting)
- Pinch of salt (for frosting)
Instructions
- Preheat your oven to 350°F (175°C) and line a standard muffin tin with paper liners.
- In a medium bowl, combine flour, brown sugar, oats, cinnamon, and salt. Cut in the cold butter using a pastry cutter until it resembles coarse crumbs. Refrigerate while preparing the cupcake batter.
- In another medium bowl, whisk together flour, baking powder, salt, cinnamon, and nutmeg until well combined.
- In a large bowl, cream together softened butter and granulated sugar using an electric mixer until light and fluffy.
- Add eggs one at a time while beating well after each addition. Then mix in vanilla extract.
- Gradually add dry ingredients to wet ingredients, alternating with milk. Mix on low speed just until combined after each addition.
- Gently fold diced apples into the batter using a rubber spatula.
- Divide batter evenly among muffin cups, filling each about 2/3 full.
- Generously sprinkle streusel topping over each cupcake.
- Bake for 22-25 minutes or until a toothpick inserted into the center comes out clean.
- Cool cupcakes in the pan for 5 minutes before transferring them to a wire rack to cool completely.
- Beat together softened cream cheese and butter until smooth. Gradually add powdered sugar before mixing in vanilla, cinnamon, and salt.
- Once completely cool, pipe or spread frosting on top of each cupcake.
- Prep Time: 20 minutes
- Cook Time: 25 minutes
- Category: Dessert
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 cupcake (75g)
- Calories: 230
- Sugar: 16g
- Sodium: 150mg
- Fat: 10g
- Saturated Fat: 5g
- Unsaturated Fat: 4g
- Trans Fat: 0g
- Carbohydrates: 33g
- Fiber: 1g
- Protein: 3g
- Cholesterol: 40mg





